Molecular Cancer Therapeutics CTRC-AACR San Antonio Breast Cancer Symposium
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Cancer Research Clinical Cancer Research
Cancer Epidemiology Biomarkers & Prevention Molecular Cancer Therapeutics
Molecular Cancer Research Cancer Prevention Research
Cancer Prevention Journals Portal Cancer Reviews Online
Annual Meeting Education Book Meeting Abstracts Online

This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Kosciolek, B. A.
Right arrow Articles by Rowley, P. T.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Kosciolek, B. A.
Right arrow Articles by Rowley, P. T.
Vol. 2, 209-216, March 2003     Molecular Cancer Therapeutics
© 2003 American Association for Cancer Research

Inhibition of Telomerase Activity in Human Cancer Cells by RNA Interference1

Barbara A. Kosciolek, Kriton Kalantidis, Martin Tabler and Peter T. Rowley2

Department of Medicine and Division of Genetics, University of Rochester School of Medicine, Rochester, New York 14642 [B. A. K., P. T. R.], and Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, GR-71110 Heraklion/Crete, Greece [K. K., M. T.]

2 To whom requests for reprints should be addressed, at Division of Genetics, Box 641, Rochester, NY 14642. Phone: (585) 275-3461; Fax: (585) 273-1034; E-mail peter_rowley{at}urmc.rochester.edu


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Telomerase is an attractive molecular target toward which to direct cancer therapeutic agents because telomerase activity is present in most malignant cells but undetectable in most normal somatic cells. Short duplex RNA (short-interfering RNA or siRNA) has recently been shown to be an effective method for inhibiting the expression of a given gene in human cells. Accordingly, we evaluated the ability of siRNA to inhibit telomerase activity in human cancer cells. Human cancer cell lines were transfected with 21 nt double-stranded RNA homologous to either the catalytic subunit of telomerase (human telomerase reverse transcriptase) or to its template RNA [human telomerase RNA(hTR)]. Both types of agents reduced telomerase activity in a variety of human cancer cell lines representing both carcinomas and sarcomas. Inhibition was dose-dependent, although modest in degree and, as expected, transient in duration. Transfection of HeLa cells using a plasmid containing the hTR gene in both forward and reverse orientations, intended to create a duplex of the hTR transcripts endogenously, resulted in decreased telomerase activity, decreased telomerase RNA content, and decreased telomeric DNA content but no decrease in the untargeted human telomerase reverse transcriptase mRNA. Telomerase inhibition by siRNA is notable because telomerase is regarded as restricted to the nucleus, whereas RNA interference is commonly regarded as restricted to the cytoplasm.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
dsRNA3, a hybrid consisting of a sense and antisense strand of an endogenous mRNA, can initiate a cellular response that results in the sequence-specific degradation of homologous single-stranded RNA. This occurs in a wide variety of eukaryotic organisms ranging from protozoa to mammals, including plants. The process is called PTGS in plants and RNAi in animals (reviewed in Refs. 13). The term posttranscriptional indicates that RNA synthesis as such is not affected. Instead, the RNA transcript gets specifically degraded so that the corresponding gene becomes silenced. PTGS and RNAi apparently represent an old and evolutionarily conserved defense mechanism against parasitic RNAs, including RNA viruses. PTGS has been extensively studied in plants where viral dsRNA initiates the host response that keeps the virus infection under control (47).

PTGS and RNAi share mechanistic details. The dsRNA is the key trigger, which gets processed by double-strand-specific RNase to shorter RNA fragments of both polarities observed first by Hamilton and Baulcombe (8). In Drosophila, the RNase-III type enzyme Dicer was identified (9). It is responsible for this processing reaction and related enzymes have been identified in other organisms (1013). The processing product generated by Dicer is a dsRNA of ~21–22 nucleotides and identical to the short RNAs observed by Hamilton and Baulcombe (8, 14). However, the short RNA is not a plain double strand but has characteristic termini consisting of two unpaired 3'-terminal nucleotides on either side (15). It is not a simple degradation product but rather an important intermediate of the PTGS/RNAi reaction. In the further course of this process, the short dsRNA gets incorporated into a multicomponent protein complex called RISC (16). RISC can be considered a RNase, and the incorporated short RNA confers sequence-specificity upon this complex. It is believed that the incorporated short dsRNA guides the RISC to the homologous target RNA.

Because the short RNAs are not mere degradation products of the dsRNA trigger but functional intermediates, could artificially generated short dsRNAs initiate the RNAi response? Elbashir et al.(17) found that chemically synthesized RNAs that form a double-strand with the characteristic two unpaired nucleotides at the 3' termini could initiate RNAi, even in a mammalian cell line (18). Similar results were obtained by Caplen et al. (19). Boutla et al. (20) demonstrated RNAi with chemically synthesized RNAs also for whole organisms such as Drosophila embryos. In view of the potential to initiate the RNAi response, Elbashir et al. (18) introduced the term "siRNA" for these short RNA duplexes. It was also shown that it is beneficial to use 5'-phosphorylated RNAs (20). Meanwhile, many examples have demonstrated the usefulness of siRNAs, which include the induction of resistance to viruses, i.e., HeLa cell resistance to polio virus (21) and to HIV (22). The question of specificity of the RNAs has not been finally answered. Some systems were sensitive to sequence deviation (15), whereas others were tolerant (20, 23).

From findings described above, it is evident that two ways of inducing RNAi are available, first using long dsRNA and second using siRNA. Long dsRNA is capable of inhibiting specific gene expression in undifferentiated mammalian cells but produces nonspecific inhibition in differentiated cells (24, 25). In differentiated cells, long dsRNA induces the expression of a variety of genes involved in host defense against foreign nucleic acids, including protein kinase PKR, IFNs, 2'-5'-oligoadenylate (2–5A) synthetase, and sequence-nonspecific RNase L (2628). Hence, the discovery that short dsRNA efficiently silences genes was a welcome discovery because it implied that a short duplex might be useful for gene silencing in mammalian cells while avoiding the induction of the IFN response.

Here, we present data showing that RNAi technology can be harnessed to down-regulate telomerase components, resulting in decreased telomerase activity in human cancer cells. This is of interest because telomerase is a promising target for cancer chemotherapy. We used two types of RNA triggers: first, chemically synthesized siRNA; and second, a long dsRNA that was expressed in the target cells from a hairpin construct. Hairpin DNA contains sense and antisense sequences so that an RNA transcript will form an intramolecular double-strand. Similar hairpin constructs have been shown to initiate RNAi for various targets in diverse biological systems such as plants, trypanosomes (2932), Drosophila (33, 34), and mouse (25). Unlike an ordinary enzyme, telomerase has an RNA and a protein component that are both necessary for telomerase activity. We targeted each component: (a) the telomerase RNA (hTR), which contains the template for the telomere sequence; and (b) the mRNA encoding the catalytically active protein component, the telomerase reverse transcriptase hTERT.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
siRNAs.
dsRNA was synthesized by Xeragon (Huntsville AL). For telomerase RNA, hTR no. 1 siRNA targeted the region containing the telomere repeat template sequence (35), shown in boldface: 5'-UUGUCUAACCCUAACUGAG-TT-3' and 3'-TT-AACAGAUUGGGAUUGACUC-5'.

hTR no. 2 siRNA targeted a 19-bp sequence centered in the 26-bp L6 loop, the longest single-stranded region in hTR according to the secondary structure proposed by Chen et al. (36): 5'-GGCTTCTCCGGAGGCACCCTT-3' and 3'-TT-CCGA AGA GGC CTC CGT GGG-5'.

In the case of the mRNA for telomerase’s protein catalytic subunit, hTERT, the target was the region containing the site of the dominant negative mutation (bolded) used to inactivate the gene by Hahn et al. (Ref. 37; shown is the normal sequence): 5'-CAAGGUGGAUGUGACGGGCTT-3' and 3'-TTGUUGCACCUACACUGCCCG-5'.

siRNA Transfection.
Cell lines were obtained from American Type Culture Collection and maintained in the media recommended by them. Cells were transfected by the method of Tuschl (18). Cells in 0.5-ml aliquots were plated in a 24-well plate at a concentration estimated to provide 30–40% confluence 16 h later. At that time, dsRNA for either hTR or hTERT (0.25, 0.5, 1, or 2 µg) was diluted with 125 µl of Optimem medium (Invitrogen). In a separate tube, 7.5 µl of oligofectamine (Invitrogen) was diluted with 30 µl of Optimem. The two solutions were mixed gently by inversion and incubated at room temperature for 7–10 min. The contents of the two tubes were then combined, mixed gently by inversion, and incubated at room temperature for 20–25 min. One hundred µl containing the liposome complexes was added to the culture medium in each well and mixed by gentle rocking for 30 s. HeLa cells were maintained in serum throughout, but for other cell types, serum was removed for the first 4 h of transfection. At 22 or 42 h, cells were trypsinized, counted, and 2000 cells removed for assay of telomerase activity.

Telomerase Activity.
Telomerase activity was measured by the TRAPeze assay (Serologicals, formerly Intergen) based on the work of Kim et al. (38), Piatyszek et al. (39), and Wright et al. (40). Pilot experiments demonstrated that siRNA, when added to the telomerase activity reaction mixture in the amounts that could be introduced by cell lysate, did not alter telomerase activity. Some variability was noted in telomerase activity in replicate experiments; in such cases, we have provided the data from a typical experiment.

Quantitation of Telomerase RNA.
Total RNA was purified using the SV Total RNA Isolation System (Promega). Telomerase RNA was quantified by a reverse transcriptase-PCR assay. Fifty or 100 ng of total RNA was incubated in 5 µM random hexamers (Pharmacia-LKB), 0.5 mM deoxyribonucleoside triphosphates x 4, 0.5 unit/µl RNAsin (Promega), 1 mM DTT, and 2.5 units/ml Moloney leukemia virus reverse transcriptase (Invitrogen) in 50 mM KCl, 10 mM Tris-Cl (pH 9.0), and 0.1% Triton X-100 in 20 µl for 45 min at 37°C. The reaction was then heated to 95°C for 10 min to denature the reverse transcriptase.

Each PCR reaction contained 10 µl of the reverse transcriptase reaction mixture, 0.5 µM primers, 10 mM deoxyribonucleoside triphosphates x 4, 2.5 µCi ({alpha}-32P)dCTP, 3000 Ci/mmol, in 2.0 mM MgCl2, 40 mM KCl, 8 mM Tris-Cl (pH 9.0), and 0.1% Triton X-100 in 50 µl. The products of the PCR reaction were electrophoresed in 10% nondenaturing polyacrylamide gel in 1x TBE at 40 V for 18 h. Radioactivity was quantified by phosphorimaging. The value of the no RNA control was subtracted from each experimental value.

The primers used were 5'-CTGGGAGGGGTGGTGGCCATTT-3' and 5'-CGAACGGGCCAGCAGCTGACAT-3'. Reaction parameters were 94°C for 20 s, 50°C for 20 s, and 72°C for 30 s for 25 cycles.

Quantitation of hTERT mRNA.
hTERT mRNA was quantified by a reverse transcriptase-PCR method similar to that used to quantify telomerase RNA, except that the Mg2+ concentration in the PCR reaction was 1.0 mM, and the primers were 5'-GCCAGAACGTTCCGCAGAGAAAA-3' and 5'-AATCATCCACCAAACGCAGGAGC-3'. Reaction parameters were 94°C for 20 s, 48°C for 30 s, and 72°C for 30 s for 30 cycles.

Hairpin Construction.
The pSPT BM20 plasmid was purchased from Boehringer Mannheim, now Roche Molecular Biochemicals. The SP6 promoter was replaced with the T3 promoter. The AccI 1440-bp fragment from bacteriophage lambda was inserted at the AccI site. The pGRN164 plasmid containing the human telomerase (hTR) gene was kindly provided by Dr. Gregg Morin of Geron Corporation (Menlo Park, CA). The hTR gene was extracted as a HindIII/SacI fragment and inserted into the equivalent site of the modified pSPT BM20 containing the {lambda} fragment, henceforth called pT3htr. The hTR gene was extracted from the pGRN164 plasmid this time as a HindIII/BamHI fragment and inserted into the equivalent site of the pBluescript II KS plasmid (Stratagene). The hTR gene was then extracted from the Bluescript vector as a KpnI/BamHI fragment and inserted into the equivalent site of a pT3T7 vector (Boehringer Mannheim). SalI was used to extract the fragment from pT3T7 because it cuts once before the hTR gene by the site brought from pBluescript (near the KpnI end) and once after the BamHI site at the preexisting SalI site of pSPT BM20. This SalI fragment containing the hTR gene was then inserted at the SalI site recreated at the end of the lambda-spacer insertion of pT3htr, henceforth called phtrF (Fig. 1). The orientation of this second hTR insertion was selected, using BamHI digestion, to be opposite to that of the original hTR insertion and hence created a hairpin, which could be excised as a simple HindIII fragment. The excised HindIII fragment was inserted into the equivalent site of the mammalian expression vector pZeoSV2/lac2(+) (Invitrogen) to make pZeoSV2-hTR.



View larger version (18K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 1 Map of phtrF plasmid showing insert (bolded) containing forward and reverse orientations of the human telomerase RNA gene (hairpin). The HindIII fragment of this plasmid was subsequently inserted into the mammalian expression vector pZeoSV2.

 
Plasmid Transfection.
HeLa cells were transfected with the pZeoSV2-hTR construct. Briefly, 1.2 x 106 cells in 1 ml of medium-10% FBS were cultured overnight in 100-mm Petri dishes to 50–60% confluency. The next day, the serum-containing medium was exchanged for serum-free medium. Eighty µl of rehydrated X-treme Gene Q2 transfection reagent (Roche Molecular Biochemicals) diluted to l ml with SFM-A was mixed with 40 µg of phtrF DNA in 0.5 ml of DNA dilution buffer (Roche Molecular Biochemicals) and incubated 5–10 min at room temperature. This mixture was then added to each dish containing cells and incubated 4 h in 5% CO2. Then 6 ml of medium containing 20% FBS were added. After overnight culture, the medium was replaced with 10 ml of medium containing 10% FBS and Zeocin (0.2 mg/ml). Additional cultures were prepared using the pZeoSV2 vector lacking the hairpin insert. Cultures were fed every 3–4 days. When colonies appeared, they were harvested using cloning rings and transferred initially to a 96-well plate. By 75 days of selection in Zeocin, sufficient cells of each clone had accumulated for the assays described below and for preparation of frozen stocks.

Quantitation of Telomeric DNA.
Telomeric DNA content was measured by the method of Bryant et al. (41). This method quantitates telomeric DNA using a slot blot and a telomere-specific probe. It also quantitates centromeric DNA by a separate slot blot of an identical sample using a centromere-specific probe. The ratio of telomeric DNA to centromeric DNA is then compared between cell samples, in our case, between hairpin-transfected cells and control cells. Thus telomeric shortening is measured as a reduction in the ratio of telomeric DNA to centromeric DNA.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Effect of siRNAs
On Telomerase Activity.   SiRNAs for hTR and hTERT depressed the telomerase activity of HCT-15 human colon carcinoma cells in a dose-dependent manner. Fig. 2 shows the effect at 44 h. Results throughout are reported as a percentage of telomerase activity of cells treated with the lipid transfecting agent only (i.e., as a percentage of activity of untreated cells). The maximum effect observed with HCT-15 cells was 25% of untreated cell activity for hTR siRNA and 35% of untreated cell activity for hTERT siRNA.



View larger version (32K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 2 siRNAs decrease telomerase activity in HCT-15 human colon carcinoma cells. HCT-15 cells were transfected with siRNA at the concentrations indicated in the figure, as described in "Materials and Methods." At 42 h, cells were harvested for telomerase assay.

 
Both agents depressed telomerase activity also in HeLa human cervical carcinoma cells in a dose-dependent manner. Fig. 3 shows the effect at 42 h. In both cell types, the siRNA for hTR was more inhibitory than the siRNA for hTERT at a given concentration. In dose-response experiments of similar design, telomerase inhibition was seen also with other types of carcinoma cells, i.e., NCI H23 human lung carcinoma cells and A431 human epidermoid carcinoma cells (data not shown).



View larger version (20K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 3 siRNAs decrease telomerase activity in HeLa human cervical carcinoma cells. HeLa cells were transfected with siRNA at the concentrations indicated in the figure, as described in "Materials and Methods." At 42 h, cells were harvested for telomerase assay.

 
Each agent depressed telomerase activity also in cells of mesodermal origin, i.e., HT-1080 human fibrosarcoma cells (Fig. 4) and CCL121 human osteosarcoma cells (data not shown). However in both these cell lines, inhibition was greater at 22 h than at 46 h, unlike the results of the carcinoma cell lines tested.



View larger version (20K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 4 siRNAs decrease telomerase activity in HT1080 human fibrosarcoma cells. HT1080 cells were transfected with siRNA at a concentration of 142 nM, as described in "Materials and Methods." At 22 and 42 h, cells were harvested for telomerase assay.

 
Using HeLa cells, four strategies were used in an effort to demonstrate more complete inhibition of telomerase activity. First, cells were treated with higher concentrations of siRNA for hTR, up to 1136 nM but inhibition was not additionally increased (data not shown). Second, cells were treated with siRNA for hTR on a daily basis. Fig. 5A shows the results of treatment using various concentrations. The bars marked 1, 2, and 3 represent the telomerase activity after 1, 2, and 3 days of treatment, each assayed 24 h after the last dose. There was progressive inhibition for the 72-h period investigated. However, the lowest value reached was only 35% of the untreated. Additions of 142 nM did not produce appreciably more inhibition than those of 71 nM. To address the question as to whether multiple transfections decrease the telomerase activity more than a single initial transfection, cells were transfected either at 0 h only or at both 0 and 24 h, and both sets were assayed at 48 h. As shown in Fig. 5B, two transfections resulted in lower telomerase activity than a single one. Third, cells were treated with siRNAs for both hTR and hTERT simultaneously. However inhibition did not exceed that seen with each separately (data not shown). Fourth, cells were treated with siRNA targeting hTR but at a different site. On the assumption that internally hybridized regions would not be accessible to siRNAs, we chose a 19-bp sequence centered in the 26-bp L6 loop, the longest single-stranded region of the hTR secondary structure proposed by Chen et al. (36). However, at 51 h, this second generation siRNA for hTR was less inhibitory than the first (Fig. 6).



View larger version (33K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 5 Effect of daily administration of hTR siRNA on HeLa cell telomerase activity. A, HeLa cells were transfected with hTR no. 1 siRNA at the concentrations indicated in the figure as described in "Materials and Methods." Cultures receiving one daily dose were assayed at 24 h. Cultures receiving two daily doses were assayed at 48 h. Cultures receiving three daily doses were assayed at 72 h. B, HeLa cells were transfected with hTR no. 1 siRNA at the concentrations indicated in the figure as described in "Materials and Methods." Both cultures receiving the agent at 0 h only and cultures receiving the agent at both 0 and 24 h were assayed at 48 h.

 


View larger version (38K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 6 Comparison of siRNAs for two different sites in hTR on telomerase activity. HeLa cells were transfected with siRNAs for hTR at the concentrations indicated in the figure, as described in "Materials and Methods," assayed at 27 or 51 h.

 
On Telomerase RNA Content.   The effect of siRNAs on telomerase RNA content is shown in Fig. 7. Compared with HeLa cells treated with the lipid transfecting agent oligofectamine alone, cells treated with hTR siRNA had decreased telomerase RNA content in the reverse transcriptase-PCR assay by >50%. In contrast, cells treated with hTERT siRNA had no decrease in telomerase RNA.



View larger version (16K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 7 Telomerase RNA content in siRNA-treated HeLa cells. HeLa cells were treated with hTR no.1 siRNA or hTERT siRNA, each at 142 nM, or oligofectamine alone and harvested 42 h later. Total RNA was isolated, and telomerase RNA content quantitated by RT-PCR, as described in "Materials and Methods." Shown are means ± SE for two experiments.

 
Effects of Hairpin Construct   To investigate cellular effects over a longer term, we used a DNA construct containing a hairpin structure targeting telomerase RNA. It contained the hTR sequence in both sense and antisense orientations separated by a space. The expected transcription product is a stem-loop RNA with the double-stranded portion representing the hTR sequence.

On Telomerase Activity.   The telomerase activity of the clones isolated is shown in Table 1. Of the five surviving clones, three clones (nos. 5, 9, and 10) had deficient telomerase activity (57, 13, and 47% of the average of the vector-only controls) and two (nos. 3 and 4) did not.


View this table:
[in this window]
[in a new window]

 
Table 1 Telomerase activity of clones

 
On Telomerase RNA Content.   The telomerase RNA content of these clones is shown in Fig. 8. The three with deficient telomerase activity (nos. 5, 9, and 10) had low telomerase RNA content. The two with normal telomerase activity (nos. 3 and 4) had normal telomerase RNA content.



View larger version (26K):
[in this window]
[in a new window]
[Download PPT slide]
 
Fig. 8 Telomerase RNA assay of clones transfected with pZeoSV2-hTR plasmid after culture for 75 days. The telomerase RNA content was determined by a reverse transcriptase-PCR assay as described in "Materials and Methods" using either 50 or 100 ng RNA.

 
On hTERT mRNA Content.   The clones were assayed for hTERT mRNA content also, using a similar reverse transcriptase-PCR assay. None of the five clones was deficient in hTERT mRNA content (results not shown).

On Telomeric DNA Content.   Four of five clones had a reduced telomeric DNA content at 75 days and one did not. The reduction in the four cases was 45% (±18% SD) compared with the average value for untreated cells and for cells transfected with the vector without the hairpin insert.


    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Our results show that telomerase activity in human cancer cells can be inhibited by short dsRNAs (siRNAs) targeting telomerase components. Inhibition was shown in a variety of carcinoma cell lines (HCT-15 colon carcinoma, HeLa cervical carcinoma, NCI H23 lung carcinoma, and A431 epidermoid carcinoma). Inhibition was shown also in cell lines of mesodermal origin (CCL121 osteosarcoma and HT-1080 fibrosarcoma), although inhibition appeared to be of shorter duration than in the carcinoma cell lines tested. Inhibition was dose-dependent. hTR or hTERT were both susceptible targets.

To evaluate siRNA against telomerase as an anticancer agent, it will be necessary to achieve more complete inhibition of activity than demonstrated here. Surprisingly, above a certain concentration, increases in siRNA concentration did not increase inhibition. Repeated doses also failed to completely inhibit, as did administration of siRNAs for hTR and hTERT together. The exact site targeted in the RNA may be a key factor, as has proved to be the case with antisense inhibition because some sites are bonded internally or to neighboring molecules, but the cost of the reagents prevented us from exploring many sites.

The effect of hTR siRNA in decreasing telomerase RNA was a sequence-specific one. siRNA targeting hTERT mRNA did not decrease telomerase RNA.

To investigate longer term effects, we used a hairpin structure. A DNA construct containing a hairpin structure targeting telomerase RNA transfected into HeLa cells decreased the content of telomerase RNA. Two pieces of evidence suggest a causal relationship. First, the clones deficient in telomerase activity were also deficient in telomerase RNA content, whereas the clones without a deficiency in telomerase activity were not deficient in telomerase RNA content. Second, the effect was a specific one in the sense that none of the clones had a deficiency in hTERT mRNA, an RNA species that was not targeted.

Across the clones at 75 days, the telomerase activity was roughly correlated with telomerase RNA content, but neither was well correlated with telomeric DNA content. Culture of the clones is continuing in order to follow telomere content and to determine whether, as telomeres shorten further, impaired clonogenicity, chromosomal fusions, and apoptosis develop (42, 43).

RNAi is regarded as a primarily cytoplasmic process as suggested by two previous observations. In Drosophila cells, the RISC copurifies with ribosomes (44). In Caenorhabditis elegans, siRNAs targeting intronic sequences are not effective inducers of RNAi (45, 46). Zeng and Cullen (47) have recently presented evidence that, in human cells, RNAi is restricted to the cytoplasm.

Hence, telomerase, which obviously acts in the nucleus, might be expected to be exempt from RNAi. hTR contains a nucleolar localization signal, i.e., a conserved H/ACA box found in its 3' portion (48, 49). hTERT also contains a nucleolar localization signal in its 15 NH2-terminal amino acids; mutations in this region prevent complex formation between hTERT and hTR (5052).

The apparent susceptibility of telomerase to siRNA as shown by the above data has several possible explanations. hTERT mRNA is presumably translated in the cytoplasm, but the susceptibility of hTR to siRNA attack is not readily explained. One possibility is that telomerase components occur in the cytoplasm transiently (53) or are exposed to cytoplasmic components during mitosis. Restriction of RNAi to the cytoplasm and the transiency of telomere components in the cytoplasm might together explain our inability to more completely inhibit telomerase activity using RNAi. Alternatively, there may be a difference in this regard between the 293T human embryonic kidney cell line of nonmalignant origin used by Zeng and Cullen (47) and the multiple types of cell lines used in our work, all of malignant origin. In addition, there may be a difference in RNAi induced by endogenously produced RNA as in the Zeng and Cullen work and in RNAi induced by transfected duplex RNA as in our work. Finally, there are observations that suggest some parts of the RNAi process may be nuclear. For example, siRNA can be observed in the case of viroids, which are subviral RNA pathogens that replicate in the nucleus via an RNA double strand (54). Matzke et al. (55) have pointed out that one of the two Dicer homologues in Arabidopsis contains two bipartite nuclear localization signals. The recent finding that small RNAs resembling siRNAs function to silence chromatin in yeast (56) and to rearrange the genome in Tetrahymena (57) is consistent with siRNAs operating in the nucleus of mammalian cells. The use of the U6 snRNA promoter cassettes in inducing RNAi in human cells, shown by many groups, may provide additional evidence that RNAi can occur in the nucleus (58) because the transcripts of such cassettes are primarily nucleoplasmic (59).

Telomerase remains an attractive target for cancer therapy because telomerase is present in most malignant cells but undetectable in most normal somatic cells (60). Thus an agent effectively inhibiting telomerase could be active against many forms of malignancy yet spare most types of normal cells (61). Nucleic acid agents hold the promise of a degree of specificity that may be difficult to achieve with small molecules. Although nucleic acid agents in clinical trials currently are DNA rather than RNA, dsRNA may have the stability required for clinical use.


    Acknowledgments
 
We thank Christos Bartzos for technical assistance.


    Footnotes
 
1 Supported by Senior International Fellowship Grant 1FO6 TW02318 (to P. T. R. and the host institution) and grants from the Institute of Molecular Biology and Biotechnology, the National Leukemia Research Association, and the Elsa U. Pardee Foundation. Back

3 The abbreviations used are: dsRNA, double-stranded RNA; PTGS, posttranscriptional gene silencing; RNAi, RNA interference; RISC, RNA-induced silencing complex; siRNA, short-interfering RNA; hTR, human telomerase RNA; hTERT, human telomerase reverse transcriptase; FBS, fetal bovine serum. Back

The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Received 8/28/02; revised 12/11/02; accepted 12/31/02.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

  1. Hannon, G. J. RNA interference.Nature (Lond.) , 418:244 –251,2002 .[CrossRef][Medline]
  2. Hutvagner, G., and Zamore, P. D. RNAi: nature abhors a double-strand.Curr. Opin. Genet. Dev. , 12:225 –232,2002 .[CrossRef][Medline]
  3. Sharp, P. A. RNA interference–2001.Genes Dev. , 15:485 –490,2001 .[Free Full Text]
  4. Matzke, M. A., Matzke, A. J., Pruss, G. J., and Vance, V. B. RNA-based silencing strategies in plants.Curr. Opin. Genet. Dev. , 11:221 –227,2001 .[CrossRef][Medline]
  5. Vance, V., and Vaucheret, H. RNA silencing in plants: defense and counterdefense.Science (Wash. DC) , 292:2277 –2280,2001 .[Abstract/Free Full Text]
  6. Voinnet, O. RNA silencing as a plant immune system against viruses.Trends Genet. , 17:449 –459,2001 .[CrossRef][Medline]
  7. Waterhouse, P. M., Wang, M., and Finnegan, E. J. Role of short RNAs in gene silencing.Trends Plant Sci. , 6:297 –301,2001 .[CrossRef][Medline]
  8. Hamilton, A. J., and Baulcombe, D. C. A species of small antisense RNA in post-transcriptional gene silencing in plants.Science (Wash. DC) , 286:950 –952,1999 .[Abstract/Free Full Text]
  9. Bernstein, E., Caude, A. A., Hammond, S. M., and Hannon, G. J. Role for a bidentate ribonuclease in the initiation step of RNA interference.Nature (Lond.) , 409:363 –366,2001 .[CrossRef][Medline]
  10. Grishok, A., Pasquinelli, A. E., Conte, D., Li, N., Parrish, S., Ha, I., Baillie, D. L., Fire, A., Ruvkun, G., and Mello, C. C. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.Cell , 106:23 –34,2001 .[CrossRef][Medline]
  11. Hutvagner, G., McLachlan, J., Pasquinelli, A. E., Balint, E., Tuschl, T., and Zamore, P. D. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA.Science (Wash. DC) , 293:834 –838,2001 .[Abstract/Free Full Text]
  12. Jacobsen, S. E., Running, M. P., and Meyerowitz, E. M. Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems.Development (Camb.) , 126:5231 –5243,1999 .[Abstract]
  13. Nicholson, R. H., and Nicholson, A. W. Molecular characterization of a mouse cDNA encoding Dicer, a ribonuclease III ortholog involved in RNA interference. Mamm.Genome , 13:67 –73,2002 .
  14. Zamore, P. D., Tuschl, T., Sharp, P. A., and Bartel, D. P. RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals.Cell , 101:25 –33,2000 .[CrossRef][Medline]
  15. Elbashir, S. M., Martinez, J., Patkaniowska, A., Lendeckel, W., and Tuschl, T. Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate.EMBO J , 20:6877 –6888,2001 .[CrossRef][Medline]
  16. Hammond, S. M., Boettcher, S., Caudy, A. A., Kobayashi, R., and Hannon, G. J. Argonaute 2, a link between genetic and biochemical analyses of RNAi.Science (Wash. DC) , 293:1146 –1150,2001 .[Abstract/Free Full Text]
  17. Elbashir, S. M., Lendeckel, W., and Tuschl, T. RNA interference is mediated by 21- and 22-nucleotide RNAs.Genes Dev. , 15:188 –200,2001 .[Abstract/Free Full Text]
  18. Elbashir, S. M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K., and Tuschl, T. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.Nature (Lond.) , 411:494 –498,2001 .[CrossRef][Medline]
  19. Caplen, N. J., Parrish, S., Imani, F., Fire, A., and Morgan, R. A. Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems.Proc. Natl. Acad. Sci. USA , 98:9742 –9747,2001 .[Abstract/Free Full Text]
  20. Boutla, A., Delidakis, C., Livadaras, I., Tsagris, M., and Tabler, M. Short 5'-phosphorylated double-stranded RNAs induce RNA interference in Drosophila.Curr. Biol. , 11:1776 –1780,2001 .[CrossRef][Medline]
  21. Gitlin, L., Karelsky, S., and Andino, R. Short interfering RNA confers intracellular antiviral immunity in human cells.Nature (Lond.) , 48:430 –434,2002 .
  22. Jacque, J-M., Triques, K., and Stevenson, M. Modulation of HIV-1 replication by RNA interference.Nature (Lond.) , 48:435 –438,2002 .
  23. Holen, T., Amarzguioui, M., Wiiger, M. T., Babaie, E., and Prydz, H. Positional effects of short interfering RNAs targeting the human coagulation trigger tissue factor.Nucleic Acids Res. , 30:1757 –1766,2002 .[Abstract/Free Full Text]
  24. Billy, E., Brondani, V., Zhang, H., Muller, U., and Filipowicz, W. Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines.Proc. Natl. Acad. Sci. USA , 98:14428 –14433,2001 .[Abstract/Free Full Text]
  25. Yang, S., Tutton, S., Pierce, E., and Yoon, K. Specific double-stranded RNA interference in undifferentiated mouse embryonic stem cells.Mol. Cell. Biol. , 21:7807 –7816,2001 .[Abstract/Free Full Text]
  26. Clemens, M. J., and Elia, A. The double-stranded RNA-dependent protein kinase PKR: structure and function.J. Interferon Cytokine Res. , 17:503 –524,1997 .[Medline]
  27. Stark, G., Kerr, I., Williams, B. R. G., Silverman, R. H., and Schreiber, R. D. How cells respond to interferons.Annu. Rev. Biochem. , 6:227 –264,l998 .
  28. Harcourt, J. L., Hagan, M. K., and Offermann, M. K. Modulation of double-stranded RNA-mediated gene induction by interferon in human umbilical vein endothelial cells.J. Interferon Cytokine Res. , 20:1007 –1013,2000 .[CrossRef][Medline]
  29. LaCount, D. J., Bruse, S., Hill, K. L., and Donelson, J. E. Double-stranded RNA interference in Trypanosoma brucei using head-to-head promoters.Mol. Biochem. Parasitol. , 111:67 –76,2000 .[CrossRef][Medline]
  30. Shi, H., Djiking, A., Mark, T., Wirtz, E., Tshudi, C., and Ullu, E. Genetic interference in Typanosoma brucei by heritable and inducible doubles-stranded RNA.RNA , 6:1069 –1076,2000 .[Abstract]
  31. Wang, Z., Morris, J. C., Drew, M. E., and Englund, P. T. Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promotors.J. Biol. Chem. , 275:40174 –40179,2000 .[Abstract/Free Full Text]
  32. Tavernarakis, N., Wang, S. L., Dorovkov, M., Ryazanov, A., and Driscoll, M. Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes.Nat. Genet. , 24:180 –183,2000 .[CrossRef][Medline]
  33. Kennerdell, J. R., and Carthew, R. W. Heritable gene silencing in Drosophila using double-stranded RNA.Nat. Biotechnol. , 18:896 –898,2000 .[CrossRef][Medline]
  34. Ui-Tei, K., Zenno, S., Mihata, Y., and Saigo, K. Sensitive assay of RNA interference in Drosophila and Chinese hamster cultured cells using firefly luciferase gene as target.FEBS Lett. , 479:79 –82,2000 .[CrossRef][Medline]
  35. Feng, J., Funk, W. D., Wang, S. S., Weinrich, S. L., Avilion, A. A., Chiu, C. P., Adams, R. R., Change, E., Allsopp, R. C., Yu, J., Le, S., West, M. D., Harley, C. B., Andrews, W. H., Greider, C. W., and Villeponteau, B. The RNA component of human telomerase.Science (Wash. DC) , 269:1236 –1241,1995 .[Abstract/Free Full Text]
  36. Chen, J-L., Blasco, M. A., and Greider, C. W. Secondary structure of vertebrate telomerase RNA.Cell , 100:503 –514,2000 .[CrossRef][Medline]
  37. Hahn, W. C., Counter, C. M., Lundberg, A. S., Beijersbergen, R. L., Brooks, M. W., and Weinberg, R. A. Creation of human tumour cells with defined genetic elements.Nature (Lond.) , 400:464 –468,1999 .[CrossRef][Medline]
  38. Kim, N. W., Piatyszek, M. A., Prowse, K. R., Harley, C. B., West, M. D., Ho, P. O., Coviello, G. M., Wright, W. E., Weinrich, S. L., and Shay, J. W. Specific association of human telomerase activity with immortal cells and cancer.Science (Wash. DC) , 266:2011 –2015,1994 .[Abstract/Free Full Text]
  39. Piatyszek, M. A., Kim, N. W., Weinrich, S. L., Hiyama, K., Hiyama, E., Wright, W. E., and Shay, J. W. Detection of telomerase activity in human cells and tumors by a telomeric repeat amplification protocol (TRAP).Methods Cell. Sci. , 17:1 –15,1995 .
  40. Wright, W. E., Shay, J. W., and Piatyszek, M. A. Modifications of a telomere repeat amplification protocol (TRAP) result in increased reliability, linearity, and sensitivity.Nucleic Acids Res. , 23:3794 –3795,l995 .[Free Full Text]
  41. Bryant, J. E., Hutchings, K. G., Moyzis, R. K., and Griffith, J. K. Measurement of telomeric DNA content in human tissues.Biotechniques , 23:476 –484,l997 .[Medline]
  42. Rowley, P. T., and Tabler, M. Telomerase inhibitors.Anticancer Res. , 20:4419 –4430,2000 .[Medline]
  43. White, L. K., Wright, W. E., and Shay, J. W. Telomerase inhibitors.Trends Biotechnol. , 19:114 –120,2001 .[CrossRef][Medline]
  44. Hammond, S. M., Bernstein, E., Beach, D., and Hannon, G. J. An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.Nature (Lond.) , 404:293 –296,2000 .[CrossRef][Medline]
  45. Fire, A., Xu, S., Montgomery, M. K., Kostas, S. A., Driver, S. E., and Mello, C. C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.Nature (Lond.) , 391:806 –811,1998 .[CrossRef][Medline]
  46. Ngo, H., Tschudi, C., Gull, K., and Ullu, E. Double-stranded RNA induces mRNA degradation in Trypanosoma brucei.Proc. Natl. Acad. Sci. USA , 95:14687 –14692,1998 .[Abstract/Free Full Text]
  47. Zeng, Y., and Cullen, B. R. RNA interference in human cells is restricted to the cytoplasm.RNA , 8:1 –6,2002 .[Abstract]
  48. Mitchell, J. R, Cheng, J., and Collins, K. A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3' end.Mol. Cell. Biol. , 19:567 –576,l999 .[Abstract/Free Full Text]
  49. Lukiowiak, A. A., Narayanan, A., Zhu-Hong, L., Terns, R. M., and Terns, M. P. The snoRNA domain of vertebrate telomerase RNA functions to localize the RNA within the nucleus.RNA , 7:1833 –1844,2001 .[Abstract]
  50. Yang, Y., Chen, Y., Zhang, C., Huang, H., and Weissman, S. M. Nucleolar localization of hTERT protein is associated with telomerase function.Exp. Cell Res. , 277:201 –209,2002 .[CrossRef][Medline]
  51. Huang, J. J., Lin, M. C., Bai, Y. X. B., Jing, D. D., Wong, B. C. Y., Han, S. W., Lin, J., Xu, B., Huang, C. F., and Kung, H. F. Ectopic expression of a COOH-terminal fragment of the human telomerase reverse transcriptase leads to telomere dysfunction and reduction of growth and tumorigenicity in HeLa cells.Cancer Res. , 62:3226 –3232,2002 .[Abstract/Free Full Text]
  52. Etheridge, K. T., Banik, S. R. B., Armbruster, B. N., Zhu, Y., Terns, R. M., Terns, M. P., and Counter, C. M. The nucleolar localization domain of the catalytic subunit of human telomerase.J. Biol. Chem. , 277:24764 –24770,2002 .[Abstract/Free Full Text]
  53. Li, H., Lin-Lin, A., Funder, J. W., and Liu, J. P. Protein phosphatase 2A inhibits nuclear telomerase activity in human breast cancer cells.J. Biol. Chem. , 272:16729 –16732,1997 .[Abstract/Free Full Text]
  54. Papaefthimiou, I., Hamilton, A., Denti, M., Baulcombe, D., Tsagris, M., and Tabler, M. Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing.Nucleic Acids Res. , 29:2395 –2400,2001 .[Abstract/Free Full Text]
  55. Matzke, M., Matzke, A. J., and Kooter, J. M. RNA: guiding gene silencing.Science (Wash. DC) , 29:1080 –1083,2001 .
  56. Volpe, T. A., Kidner, C., Hall, I. M., Teng, G., Grewal, S. I. V., and Martienssen, R. A., Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.Science (Wash. DC) , 297:1833 –1837,2002 .[Abstract/Free Full Text]
  57. Mochizuki, L., Fine, N. A., Fujisawa, T., and Gorovsky, M. A. Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena.Cell , 110:689 –699,2002 .[CrossRef][Medline]
  58. Paul, C. P., Good, P. D., Winer, I., and Engelke, D. R. Effective expression of small interfering RNA in human cells.Nat. Biotechnol. , 20:505 –508,2002 .[CrossRef][Medline]
  59. Good, P. D., Krikos, A. J., Li, S. X., Bertrand, E., Lee, N. S., Giver, L., Ellington, A., Zaia, J. A., Rossi, J. J., and Engelke, D. R. Expression of small, therapeutic RNAs in human cell nuclei.Gene Ther. , 4:45 –54,l997 .[CrossRef][Medline]
  60. Hanahan, D., and Weinberg. R. A. The hallmarks of cancer.Cell , 100:57 –70,2000 .[CrossRef][Medline]
  61. Sharma, S., Raymond, E., Soda, H., Sun, D., Hilsenbeck, S. G., Sharma, A., Izbicka, E., Windle, B., and Von Hoff, D. D. Preclinical and clinical strategies for development of telomerase and telomere inhibitors.Ann. Oncol. , 8:1063 –1074,1997 .[Abstract/Free Full Text]



This article has been cited by other articles:


Home page
Proc. Natl. Acad. Sci. USAHome page
S. Zhou, H. Zhou, P. J. Walian, and B. K. Jap
CD147 is a regulatory subunit of the {gamma}-secretase complex in Alzheimer's disease amyloid {beta}-peptide production
PNAS, May 24, 2005; 102(21): 7499 - 7504.
[Abstract] [Full Text] [PDF]


Home page
Molecular Cancer TherapeuticsHome page
A. Salvi, B. Arici, G. De Petro, and S. Barlati
Small interfering RNA urokinase silencing inhibits invasion and migration of human hepatocellular carcinoma cells
Mol. Cancer Ther., June 1, 2004; 3(6): 671 - 678.
[Abstract] [Full Text] [PDF]


Home page
Molecular Cancer TherapeuticsHome page
S. Mousses
Harnessing the Power of RNA Interference to Advance Anticancer Drug Development
Mol. Cancer Ther., March 1, 2003; 2(3): 217 - 218.
[Full Text] [PDF]


This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Kosciolek, B. A.
Right arrow Articles by Rowley, P. T.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Kosciolek, B. A.
Right arrow Articles by Rowley, P. T.


HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Cancer Research Clinical Cancer Research
Cancer Epidemiology Biomarkers & Prevention Molecular Cancer Therapeutics
Molecular Cancer Research Cancer Prevention Research
Cancer Prevention Journals Portal Cancer Reviews Online
Annual Meeting Education Book Meeting Abstracts Online